Index

A

addDomains() (in module psite_annotation) addInVitroKinases() (in module psite_annotation) addKinaseLibraryAnnotations() (in module psite_annotation) addModifiedSequenceGroups() (in module psite_annotation) addMotifs() (in module psite_annotation) addPeptideAndPsitePositions() (in module psite_annotation) addPSPAnnotations() (in module psite_annotation) addPSPKinaseSubstrateAnnotations() (in module psite_annotation) addPSPRegulatoryAnnotations() (in module psite_annotation) addSiteSequenceContext() (in module psite_annotation) addTurnoverRates() (in module psite_annotation) aggregateModifiedSequenceGroups() (in module psite_annotation)

annotate() (psite_annotation.annotators.ClinicalBasketAnnotator method) (psite_annotation.annotators.DomainAnnotator method) (psite_annotation.annotators.InVitroKinasesAnnotator method) (psite_annotation.annotators.KinaseLibraryAnnotator method) (psite_annotation.annotators.ModifiedSequenceAggregatorAnnotator method) (psite_annotation.annotators.ModifiedSequenceGroupAnnotator method) (psite_annotation.annotators.MotifAnnotator method) (psite_annotation.annotators.PeptidePositionAnnotator method) (psite_annotation.annotators.PSPKinasesAnnotator method) (psite_annotation.annotators.PSPRegulatoryAnnotator method) (psite_annotation.annotators.PSPStudiesAnnotator method) (psite_annotation.annotators.PTMTurnoverAnnotator method) (psite_annotation.annotators.SiteSequenceContextAnnotator method)

C

ClinicalBasketAnnotator (class in psite_annotation.annotators)

D

DomainAnnotator (class in psite_annotation.annotators)

I

InVitroKinasesAnnotator (class in psite_annotation.annotators)

K

KinaseLibraryAnnotator (class in psite_annotation.annotators)

L

load_annotations() (psite_annotation.annotators.ClinicalBasketAnnotator method) (psite_annotation.annotators.DomainAnnotator method) (psite_annotation.annotators.InVitroKinasesAnnotator method) (psite_annotation.annotators.KinaseLibraryAnnotator method) (psite_annotation.annotators.MotifAnnotator method) (psite_annotation.annotators.PeptidePositionAnnotator method) (psite_annotation.annotators.PSPKinasesAnnotator method) (psite_annotation.annotators.PSPRegulatoryAnnotator method) (psite_annotation.annotators.PSPStudiesAnnotator method) (psite_annotation.annotators.PTMTurnoverAnnotator method) (psite_annotation.annotators.SiteSequenceContextAnnotator method)

M

ModifiedSequenceAggregatorAnnotator (class in psite_annotation.annotators) ModifiedSequenceGroupAnnotator (class in psite_annotation.annotators) module psite_annotation psite_annotation.annotators

MotifAnnotator (class in psite_annotation.annotators)

P

PeptidePositionAnnotator (class in psite_annotation.annotators) psite_annotation module psite_annotation.annotators module

PSPKinasesAnnotator (class in psite_annotation.annotators) PSPRegulatoryAnnotator (class in psite_annotation.annotators) PSPStudiesAnnotator (class in psite_annotation.annotators) PTMTurnoverAnnotator (class in psite_annotation.annotators)

S

SiteSequenceContextAnnotator (class in psite_annotation.annotators)